Marko Lab Movies: Single-DNA and Single-Chromosome Experiments

name size (Mb)
description and citation if published
(current PubMed publications)
alu1.mpg
4.5
digestion of single newt mitotic chromosome using ~1 nM AluI restriction enzyme, demonstrating that well-spaced DNA cuts are sufficient to fully disconnect a mitotic chromosome
(Poirier and Marko PNAS 2002)
assmb-dimer-4fs-1p5-short.avi
5.4
lambda DNA dimer (97 kb) being assembled into a chromatin fiber using 1/20 dilution of Xenopus egg extracts, against 1.5 pN applied force
(Yan et al MBC 2007)
chromlow.mpg
0.5
single native newt chromosome undergoing reversible stretch-retract cycle
(Poirier and Marko MBC 2000)
cut-thin-fiber.mpg
2.9
mitotic newt chromosome, after being lightly digested with micrococcal nuclease and then stretched out, is cut by a single additional puff of mc nuclease
(Poirier and Marko PNAS 2002)
dimer-4fs-1p5.avi
1.8
lambda DNA dimer (97 kb) in buffer held by 1.5 pN constant force in transverse magnetic tweezer experiment, undergoing small fluctuations
(Yan et al PRE 2004; Yan et al MBC 2007)
fluct.avi
19.7
magnetic bead suspended by an individual lambda DNA (48.5 kb) attached to a cover slip, viewed in vertical magnetic tweezer setup
(Skoko et al Biochemistry 2004)
hse_assemb_2fs.avi
18.4
lambda DNA dimer (97 kb) being assembled into a chromatin fiber using 1/20 dilution of Xenopus egg extracts, against 1.5 pN applied force
(Yan et al MBC 2007)
lambda+0-052004.avi
1.9
magnetic bead suspended by an individual lambda DNA (48.5 kb) attached to a cover slip, viewed in vertical magnetic tweezer setup ; bead is being pulled by approximately 0.05 pN and is about 4 microns below surface
(Skoko et al Biochemistry 2004)
lambda+200-052004.avi
1.2
magnetic bead suspended by an individual lambda DNA (48.5 kb) attached to a cover slip, viewed in vertical magnetic tweezer setup; bead is being pulled by approximately 0.1 pN and is about 8 microns below cover slip surface
(Skoko et al Biochemistry 2004)
lambda+370-052004.avi
1.2
magnetic bead suspended by an individual lambda DNA (48.5 kb) attached to a cover slip, viewed in vertical magnetic tweezer setup ; bead is being pulled by approximately 10 pN and is about 16 microns (the full length of the DNA) below the cover slip surface
(Skoko et al Biochemistry 2004)
mg100.mpg
0.2
single mitotic newt chromosome being sprayed by 100 mM MgCl in tissue culture buffer; note reversibility of the ionic-screening-driven transition
(Poirier et al J. Cellular Biochem. 2002)
micrococ1.mpg
4.3
single mitotic newt chromosome being sprayed by ~1 nM micrococcal nuclease, which cuts DNA at all sequence sites; chromosome is disconnected and disintegrates into apparent 'droplet' of chromatin fragments
(Poirier and Marko PNAS 2002)
micrococ2.mpg
2.9
single mitotic chromosome after mild micrococcal nuclease treatment so that morphology is not changed at zero force; as it is stretched, it breaks into islands of dense chromatin connected by thin fibers
(Poirier and Marko PNAS 2002)
mitosis.mpg
90.1
mitosis in a newt lung cell; the 'hiccups' are caused by the microscope focusing through the cell periodically
triton.mpg
38.0
extraction of a single mitotic chromosome from a newt cell in mitosis; Triton X-100 0.05% by volume is used in the first pipette you see, to open a hole in the cell
Bajer-mitosisIII.avi
16.0
cell division in fragment of plant cell showing passage of linked circular chromosomes through one another, as described in A. Bajer, Chromosoma 14, 18-30 (1963)